Structural Classification of Proteins
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Superfamily: Translation proteins SH3-like domain

many known members contain KOW motif
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: SH3-like barrel [50036]
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. Superfamily: Translation proteins SH3-like domain [50104]
    many known members contain KOW motif
    link to SUPERFAMILY database - Superfamily

Families:

  1. Ribosomal proteins L24p and L21e [50105] (5)
    1. Ribosomal proteins L24 (L24p) [50106]
      1. Archaeon Haloarcula marismortui [TaxId: 2238] [50107] (44) picpic
        SQ P10972
      2. Escherichia coli [TaxId: 562] [141241] (30) picpic
        SQ P60624 1-102
      3. Deinococcus radiodurans [TaxId: 1299] [159024] (7) picpic
        SQ Q9RXJ1 4-113
      4. Thermus thermophilus [TaxId: 274] [159025] (11) picpic
        SQ Q72I15 2-102
    2. Ribosomal proteins L21e [50108]
      1. Archaeon Haloarcula marismortui [TaxId: 2238] [50109] (40) picpic
        SQ P12734
  2. eIF5a N-terminal domain-like [50110] (7)
    1. Eukaryotic initiation translation factor 5a (eIF5a) [50111]
      1. Archaeon Methanococcus jannaschii [TaxId: 2190] [50112] (2) picpic
      2. Archaeon Pyrobaculum aerophilum [TaxId: 13773] [50113] (1) picpic
      3. Archaeon Pyrococcus horikoshii [TaxId: 53953] [82069] (1) picpic
      4. Leishmania infantum [TaxId: 5671] [110169] (1) picpic
        SQ Q9N9V6
      5. Leishmania mexicana [TaxId: 5665] [117167] (1) picpic
        SQ Q9N9V6 97% sequence identity
    2. Woronin body major protein (Hex1) [82070]
      1. Filamentous fungi (Neurospora crassa) [TaxId: 5141] [82071] (1) picpic
    3. Elongation factor P N-terminal domain [110170]
      1. Thermus thermophilus HB8 [TaxId: 300852] [110171] (1) picpic
        SQ Q76G20
  3. C-terminal domain of ribosomal protein L2 [50114] (5)
    1. C-terminal domain of ribosomal protein L2 [50115]
      1. Bacillus stearothermophilus [TaxId: 1422] [50116] (2) picpic
      2. Archaeon Haloarcula marismortui [TaxId: 2238] [50117] (40) picpic
        SQ P20276
      3. Thermus thermophilus [TaxId: 274] [159026] (5) picpic
        SQ Q72I07 126-272
      4. Escherichia coli [TaxId: 562] [159027] (27) picpic
        SQ P60422 125-269
      5. Deinococcus radiodurans [TaxId: 1299] [159028] (5) picpic
        SQ Q9RXJ9 128-272
  4. N-utilization substance G protein NusG, C-terminal domain [82072] (2)
    1. N-utilization substance G protein NusG, C-terminal domain [82073]
      1. Aquifex aeolicus [TaxId: 63363] [82074] (3) picpic
      2. Thermus thermophilus [TaxId: 274] [101696] (1) picpic
  5. SPT5 KOW domain-like [141242] (1)
    part of Pfam 00467
    1. Transcription elongation factor SPT5 [141243]
      1. Human (Homo sapiens) [TaxId: 9606] [141244] (1) picpic
        SQ O00267 462-523
  6. Ribosomal protein L19 [141245] (3)
    Pfam 01245
    1. Ribosomal protein L19 [141246]
      1. Escherichia coli [TaxId: 562] [141247] (9) picpic
        SQ P0A7K6 1-114
      2. Deinococcus radiodurans [TaxId: 1299] [159029] (6) picpic
        SQ Q9RWB4 2-109
      3. Thermus thermophilus [TaxId: 274] [159030] (4) picpic
        SQ P60490 1-138
  7. Ribosomal protein L14e [159031] (1)
    PfamB 032577
    1. Ribosomal protein L14e [159032]
      1. Sulfolobus solfataricus [TaxId: 2287] [159033] (1) picpic
        SQ Q980C1 1-96
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk