Structural Classification of Proteins
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Superfamily: ISP domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: ISP domain [50021]
    consists of two all-beta subdomains: conserved small domain has a rubredoxin-like fold; larger domain consists of 6 beta-stands packed in either sandwich of two 3-stranded sheets or closed barrel (n=6; S=8)
  4. Superfamily: ISP domain [50022]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Rieske iron-sulfur protein (ISP) [50023] (11)
    1. ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain [50024]
      1. Cow (Bos taurus) [TaxId: 9913] [50025] (10) picpic
      2. Chicken (Gallus gallus) [TaxId: 9031] [50026] (6) picpic
        SQ P13272 79-274 ! SQ P13272 # precursor of chains I,E and V,R
      3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [63741] (9) picpic
    2. ISP subunit from the cytochrome b6f complex, soluble domain [101665]
      1. Mastigocladus laminosus [TaxId: 83541] [101666] (6) picpic
      2. Chlamydomonas reinhardtii [TaxId: 3055] [101667] (1) picpic
    3. ISP subunit from chloroplast cytochrome bf complex [50027]
      1. Spinach (Spinacia oleracea) [TaxId: 3562] [50028] (1) picpic
    4. Arsenite oxidase Rieske subunit [50029]
      1. Alcaligenes faecalis [TaxId: 511] [50030] (2) picpic
    5. Rieske protein II (SoxF) [74918]
      1. Archaeon Sulfolobus acidocaldarius [TaxId: 2285] [74919] (1) picpic
    6. Soluble Rieske protein [89291]
      1. Thermus thermophilus [TaxId: 274] [89292] (1) picpic
    7. Rieske-type ferredoxin associated with biphenyl dioxygenase [50031]
      1. Burkholderia cepacia [TaxId: 292] [50032] (1) picpic
    8. Toluene-4-monooxygenase system protein C, TmoC [110154]
      1. Pseudomonas mendocina [TaxId: 300] [110155] (3) picpic
        SQ Q00458
  2. Ring hydroxylating alpha subunit ISP domain [50033] (7)
    1. Naphthalene 1,2-dioxygenase alpha subunit, N-domain [50034]
      1. Pseudomonas putida [TaxId: 303] [50035] (16) picpic
      2. Rhodococcus sp. ncimb12038 [TaxId: 92694] [141177] (6) picpic
        SQ Q9X3R9 1-162
    2. Biphenyl dioxygenase large subunit BphA1, N-terminal domain [110156]
      1. Rhodococcus sp. (strain RHA1) [TaxId: 101510] [110157] (2) picpic
        SQ Q53122 17-451
    3. 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO [141178]
      1. Pseudomonas putida [TaxId: 303] [141179] (1) picpic
        SQ O05935 16-163
    4. Nitrobenzene dioxygenase alpha subunit, NBDO-alpha [141180]
      1. Comamonas sp. JS765 [TaxId: 58226] [141181] (3) picpic
        SQ Q8RTL4 3-152
    5. Large subunit of cumene dioxygenase cumA1 [141182]
      1. Pseudomonas fluorescens [TaxId: 294] [141183] (1) picpic
        SQ Q51743 19-180
    6. Terminal oxygenase component of carbazole CarAa [141184]
      1. Janthinobacterium sp. j3 [TaxId: 213804] [141185] (10) picpic
        SQ Q84II6 1-142
  3. NirD-like [158991] (3)
    retains the common fold but lacks the Fe-S cluster
    1. NADH-nitrite reductase small subunit NirD [158992]
      1. Escherichia coli [TaxId: 562] [158993] (1) picpic
        SQ P0A9I8 1-108
      2. Erwinia carotovora [TaxId: 554] [158994] (1) picpic
        SQ Q6CZS1 1-122
      3. Vibrio parahaemolyticus [TaxId: 670] [158995] (8) picpic
        SQ Q87HB1 4-111
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk