Structural Classification of Proteins
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Family: Starch-binding domain

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Prealbumin-like [49451]
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands to common fold
  4. Superfamily: Starch-binding domain-like [49452]
    link to SUPERFAMILY database - Superfamily
  5. Family: Starch-binding domain [49453]

Protein Domains:

  1. Cyclodextrin glycosyltransferase, C-terminal domain [49454]
    this domain is the last one in the protein chain
    1. Bacillus circulans, different strains [TaxId: 1397] [49455] (36)
      1. 1cxl picpicxrefxrefxref
        complexed with ca, g4d, glc, glf, mpd; mutant
        1. region a:584-686 [22498] picpiclink
      2. 1ot1 picpicxrefxrefxref
        complexed with acy, ca, epe, glc, mal, mpd; mutant
        1. region a:582-686 [87393] picpiclink
      3. 1pj9 picpicxrefxrefxref
        complexed with acy, ca, glc, mal, mpd; mutant
        1. region a:582-686 [94755] picpiclink
      4. 1kcl picpicxrefxrefxref
        complexed with ca, glc, mal, mpd; mutant
        1. region a:582-686 [68446] picpiclink
      5. 1ot2 picpicxrefxrefxref
        complexed with acy, ca, epe, glc, mal, mpd; mutant
        1. region a:582-686 [87397] picpiclink
      6. 1uks picpicxrefxrefxref
        complexed with aci, ca, glb, glc, gld; mutant
        1. region a:582-686 [99518] picpiclink
        2. region b:582-686 [99522] picpiclink
      7. 1cgt picpicxrefxrefxref
        complexed with ca
        1. region a:580-684 [22484] picpiclink
      8. 1eo5 picpicxrefxrefxref
        complexed with ca, glc, mpd; mutant
        1. region a:584-686 [22497] picpiclink
      9. 1d3c picpicxrefxrefxref
        1. region a:584-686 [22496] picpiclink
      10. 1cdg picpicxrefxrefxref
        complexed with ca, mal
        1. region a:582-686 [22485] picpiclink
      11. 1ukq picpicxrefxrefxref
        complexed with aci, ca, glb, glc, gld
        1. region a:582-686 [99510] picpiclink
        2. region b:582-686 [99514] picpiclink
      12. 1pez picpicxrefxrefxref
        complexed with acy, ca, epe, glc, mal, mpd; mutant
        1. region a:582-686 [94601] picpiclink
      13. 1cxe picpicxrefxrefxref
        complexed with ca, glc, mal
        1. region a:582-686 [22486] picpiclink
      14. 1cxk picpicxrefxrefxref
        complexed with ca, glc; mutant
        1. region a:584-686 [22504] picpiclink
      15. 1kck picpicxrefxrefxref
        complexed with adh, ca, glc, glw; mutant
        1. region a:582-686 [68442] picpiclink
      16. 9cgt picpicxrefxrefxref
        complexed with ca, tm5; mutant
        1. region a:580-684 [22499] picpiclink
      17. 1cxi picpicxrefxrefxref
        complexed with ca, mal
        1. region a:582-686 [22487] picpiclink
      18. 8cgt picpicxrefxrefxref
        complexed with ca, tm6; mutant
        1. region a:580-684 [22500] picpiclink
      19. 1ukt picpicxrefxrefxref
        complexed with aci, ca, glb, glc, gld; mutant
        1. region a:582-686 [99526] picpiclink
        2. region b:582-686 [99530] picpiclink
      20. 1cgv picpicxrefxrefxref
        complexed with ca, mal; mutant
        1. region a:582-686 [22489] picpiclink
      21. 1cgx picpicxrefxrefxref
        complexed with ca, mal; mutant
        1. region a:582-686 [22501] picpiclink
      22. 3cgt picpicxrefxrefxref
        complexed with bcd, ca; mutant
        1. region a:582-684 [22488] picpiclink
      23. 1cxh picpicxrefxrefxref
        complexed with ca, glc, mal
        1. region a:582-686 [22490] picpiclink
      24. 1cgw picpicxrefxrefxref
        complexed with ca, mal; mutant
        1. region a:582-686 [22491] picpiclink
      25. 1cgy picpicxrefxrefxref
        complexed with ca, mal; mutant
        1. region a:582-686 [22492] picpiclink
      26. 5cgt picpicxrefxrefxref
        complexed with ca, glc; mutant
        1. region a:582-684 [22493] picpiclink
      27. 2dij picpicxrefxrefxref
        complexed with aci, ca, glc, gld; mutant
        1. region a:584-686 [22505] picpiclink
      28. 1cxf picpicxrefxrefxref
        complexed with acx, ca, glc, mal; mutant
        1. region a:582-686 [22510] picpiclink
      29. 1dtu picpicxrefxrefxref
        complexed with aci, ca, glc, gld; mutant
        1. region a:584-686 [22509] picpiclink
      30. 2cxg picpicxrefxrefxref
        complexed with aci, ca, glc, gld
        1. region a:582-686 [22508] picpiclink
      31. 6cgt picpicxrefxrefxref
        complexed with ca, dag, glc, opg; mutant
        1. region a:580-684 [22506] picpiclink
      32. 1tcm picpicxrefxrefxref
        complexed with ca; mutant
        1. region a:582-686 [22502] picpiclink
        2. region b:582-686 [22503] picpiclink
      33. 1cgu picpicxrefxrefxref
        complexed with ca, glc; mutant
        1. region a:580-684 [22507] picpiclink
      34. 4cgt picpicxrefxrefxref
        complexed with ca; mutant
        1. region a:582-684 [22494] picpiclink
      35. 1eo7 picpicxrefxrefxref
        complexed with ca, glc; mutant
        1. region a:584-686 [22511] picpiclink
      36. 7cgt picpicxrefxrefxref
        complexed with ca; mutant
        1. region a:582-684 [22495] picpiclink
    2. Bacillus stearothermophilus [TaxId: 1422] [49456] (1)
      1. 1cyg picpicxrefxrefxref
        complexed with ca
        1. region a:575-680 [22512] picpiclink
    3. Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422] [49457] (2)
      1. 1qho picpicxrefxrefxref
        complexed with abd, ca, mal, so4
        1. region a:577-686 [22513] picpiclink
      2. 1qhp picpicxrefxrefxref
        complexed with ca, mal, so4
        1. region a:577-686 [22514] picpiclink
    4. Bacillus sp., strain 1011 [TaxId: 1409] [49458] (8)
      SQ P05618
      1. 1pam picpicxrefxrefxref
        complexed with ca
        1. region a:583-686 [22515] picpiclink
        2. region b:583-686 [22516] picpiclink
      2. 1i75 picpicxrefxrefxref
        complexed with ca, noj
        1. region a:583-686 [61870] picpiclink
        2. region b:583-686 [61874] picpiclink
      3. 1v3k picpicxrefxrefxref
        complexed with ca; mutant
        1. region a:583-686 [108314] picpiclink
        2. region b:583-686 [108318] picpiclink
      4. 1d7f picpicxrefxrefxref
        complexed with ca; mutant
        1. region a:583-686 [22517] picpiclink
        2. region b:583-686 [22518] picpiclink
      5. 1v3m picpicxrefxrefxref
        complexed with aci, ca, glb, glc, gld; mutant
        1. region a:583-686 [108330] picpiclink
        2. region b:583-686 [108334] picpiclink
      6. 1v3j picpicxrefxrefxref
        complexed with ca; mutant
        1. region a:583-686 [108306] picpiclink
        2. region b:583-686 [108310] picpiclink
      7. 1v3l picpicxrefxrefxref
        complexed with aci, ca, glb, glc, gld; mutant
        1. region a:583-686 [108322] picpiclink
        2. region b:583-686 [108326] picpiclink
      8. 1ded picpicxrefxrefxref
        complexed with acr, ca; mutant
        1. region a:583-686 [22519] picpiclink
        2. region b:583-686 [22520] picpiclink
    5. Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId: 33950] [49459] (2)
      1. 1ciu picpicxrefxrefxref
        complexed with ca
        1. region a:579-683 [22521] picpiclink
      2. 1a47 picpicxrefxrefxref
        complexed with ca, cyl, glc, gld, gte
        1. region a:579-683 [22522] picpiclink
    6. Thermoanaerobacterium [TaxId: 28895] [158931] (2)
      1. 3bmv picpicxrefxrefxref
        automatically matched to d1a47a2
        complexed with ca, gol, so4; mutant
        1. region a:579-683 [155417] picpiclink
      2. 3bmw picpicxrefxrefxref
        automatically matched to d1a47a2
        complexed with aci, ca, cl, g6d, glc, gol, so4; mutant
        1. region a:579-683 [155421] picpiclink
  2. Glucoamylase, granular starch-binding domain [49460]
    1. Aspergillus niger [TaxId: 5061] [49461] (4)
      1. 1kul picpic
        1. chain a [22523] picpiclink
      2. 1acz picpic
        complexed with glc
        1. chain a [22524] picpiclink
      3. 1kum picpic
        1. chain a [22525] picpiclink
      4. 1ac0 picpic
        complexed with glc
        1. chain a [22526] picpiclink
  3. beta-amylase [49462]
    1. Bacillus cereus [TaxId: 1396] [49463] (15)
      1. 1vem picpicxref
        automatically matched to d1b90a1
        complexed with ca, glc
        1. region a:418-516 [120021] picpiclink
      2. 1j18 picpicxref
        complexed with acy, ca, glc, so4
        1. region a:418-516 [83956] picpiclink
      3. 1itc picpicxref
        complexed with acy, ca, glc, so4; mutant
        1. region a:418-516 [83705] picpiclink
      4. 1j0y picpicxref
        complexed with ca, glc
        1. region a:418-516 [83916] picpiclink
        2. region b:418-516 [83918] picpiclink
        3. region c:418-516 [83920] picpiclink
        4. region d:418-516 [83922] picpiclink
      5. 1ven picpicxref
        automatically matched to d1b90a1
        complexed with ca, glc; mutant
        1. region a:418-516 [120023] picpiclink
      6. 1j11 picpicxref
        complexed with ca, epg
        1. region a:418-516 [83940] picpiclink
        2. region b:418-516 [83942] picpiclink
        3. region c:418-516 [83944] picpiclink
        4. region d:418-516 [83946] picpiclink
      7. 1vep picpicxref
        automatically matched to d1b90a1
        complexed with ca, glc; mutant
        1. region a:418-516 [120027] picpiclink
      8. 1j10 picpicxref
        complexed with ca, glc, xys
        1. region a:418-516 [83932] picpiclink
        2. region b:418-516 [83934] picpiclink
        3. region c:418-516 [83936] picpiclink
        4. region d:418-516 [83938] picpiclink
      9. 1veo picpicxref
        automatically matched to d1b90a1
        complexed with ca, glc; mutant
        1. region a:418-516 [120025] picpiclink
      10. 1j12 picpicxref
        complexed with ca, ebg
        1. region a:418-516 [83948] picpiclink
        2. region b:418-516 [83950] picpiclink
        3. region c:418-516 [83952] picpiclink
        4. region d:418-516 [83954] picpiclink
      11. 1j0z picpicxref
        complexed with ca, glc
        1. region a:418-516 [83924] picpiclink
        2. region b:418-516 [83926] picpiclink
        3. region c:418-516 [83928] picpiclink
        4. region d:418-516 [83930] picpiclink
      12. 1b9z picpicxref
        complexed with act, ca, mal, so4
        1. region a:418-516 [22528] picpiclink
      13. 1cqy picpic
        1. chain a [22527] picpiclink
      14. 5bca picpicxref
        complexed with ca
        1. region a:418-516 [22529] picpiclink
        2. region b:418-516 [22530] picpiclink
        3. region c:418-516 [22531] picpiclink
        4. region d:418-516 [22532] picpiclink
      15. 1b90 picpicxref
        complexed with act, ca, so4
        1. region a:418-516 [22533] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk