Structural Classification of Proteins
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Superfamily: Starch-binding domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Prealbumin-like [49451]
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands to common fold
  4. Superfamily: Starch-binding domain-like [49452]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Rhamnogalacturonase B, RhgB, middle domain [110091] (1)
    1. Rhamnogalacturonase B, RhgB, middle domain [110092]
      1. Aspergillus aculeatus [TaxId: 5053] [110093] (1) picpic
        SQ Q00019
  2. Starch-binding domain [49453] (8)
    1. Cyclodextrin glycosyltransferase, C-terminal domain [49454]
      this domain is the last one in the protein chain
      1. Bacillus circulans, different strains [TaxId: 1397] [49455] (36) picpic
      2. Bacillus stearothermophilus [TaxId: 1422] [49456] (1) picpic
      3. Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422] [49457] (2) picpic
      4. Bacillus sp., strain 1011 [TaxId: 1409] [49458] (8) picpic
        SQ P05618
      5. Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId: 33950] [49459] (2) picpic
      6. Thermoanaerobacterium [TaxId: 28895] [158931] (2) picpic
    2. Glucoamylase, granular starch-binding domain [49460]
      1. Aspergillus niger [TaxId: 5061] [49461] (4) picpic
    3. beta-amylase [49462]
      1. Bacillus cereus [TaxId: 1396] [49463] (15) picpic
  3. PUD-like [158932] (4)
    Pfam 03714; bacterial pullanase-associated domain
    1. Pullulanase PulA [158933]
      1. Klebsiella pneumoniae [TaxId: 573] [158934] (3) picpic
        SQ P07206 39-169
      2. Streptococcus pneumoniae [TaxId: 1313] [158935] (2) picpic
        SQ Q97SQ7 135-237! SQ Q97SQ7 238-353
      3. Streptococcus pyogenes [TaxId: 1314] [158936] (4) picpic
        SQ Q1JEU6 105-211! SQ Q1JEU6 212-323
      4. Thermotoga maritima [TaxId: 2336] [158937] (5) picpic
        SQ O33840 19-102
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk