Structural Classification of Proteins
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Family: Parvoviridae-like VP

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: ssDNA viruses [88645]
    link to SUPERFAMILY database - Superfamily
  5. Family: Parvoviridae-like VP [88646]

Protein Domains:

  1. Parvovirus (panleukopenia virus) capsid protein [49661]
    1. Feline panleukopenia virus, strain b [TaxId: 10786] [49689] (1)
      1. 1fpv picpic
        1. chain a [23579] picpiclink
    2. Canine parvovirus [TaxId: 10788] [49662] (7)
      1. 1c8d picpic
        complexed with ca
        1. chain a [23375] picpiclink
      2. 1p5w picpic
        complexed with mg; mutant
        1. chain a [94150] picpiclink
      3. 2cas picpic
        1. chain a [23376] picpiclink
      4. 1p5y picpic
        mutant
        1. chain a [94152] picpiclink
      5. 4dpv picpic
        protein/DNA complex; complexed with mg
        1. chain z [23377] picpiclink
      6. 1ijs picpic
        protein/DNA complex; mutant
        1. chain p [23379] picpiclink
      7. 1c8h picpic
        complexed with ca; mutant
        1. chain a [23378] picpiclink
    3. Feline parvovirus [TaxId: 10785] [49663] (3)
      1. 1c8g picpic
        complexed with ca
        1. chain a [23380] picpiclink
      2. 1c8f picpic
        complexed with ca
        1. chain a [23381] picpiclink
      3. 1c8e picpic
        1. chain a [23382] picpiclink
    4. Porcine parvovirus [TaxId: 10796] [69201] (1)
      1. 1k3v picpic
        1. chain a [68122] picpiclink
    5. Murine minute virus, strain i [TaxId: 10794] [49665] (2)
      1. 1mvm picpic
        protein/DNA complex
        1. chain a [23383] picpiclink
      2. 1z1c picpic
        automatically matched to d1mvma_
        complexed with ca, d5m
        1. region a:39-587 [124350] picpiclink
    6. Human parvovirus B19 [TaxId: 10798] [110116] (1)
      SQ Q9JGS0 246-781
      1. 1s58 picpic
        1. chain a [105262] picpiclink
  2. Dependovirus capsid protein [74887]
    1. Adeno-associated virus, aav-2 [TaxId: 272636] [74888] (1)
      a vector for human genome therapy
      1. 1lp3 picpic
        1. chain a [74169] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk