Structural Classification of Proteins
home mail help root up expand collapse

Family: N-terminal domain of MutM-like DNA repair proteins

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: N-terminal domain of MutM-like DNA repair proteins [81625]
    pseudobarrel; capped on both ends by alpha-helices
  4. Superfamily: N-terminal domain of MutM-like DNA repair proteins [81624]
    link to SUPERFAMILY database - Superfamily
  5. Family: N-terminal domain of MutM-like DNA repair proteins [81623]

Protein Domains:

  1. DNA repair protein MutM (Fpg) [81621]
    1. Thermus thermophilus [TaxId: 274] [81609] (1)
      1. 1ee8 picpicxrefxref
        complexed with zn
        1. region a:1-121 [75824] picpiclink
        2. region b:1-121 [75827] picpiclink
    2. Bacillus stearothermophilus [TaxId: 1422] [81612] (9)
      1. 1r2z picpicxrefxref
        bound to 5,6-Dihydrouracil (DhU) containing DNA
        complexed with dhu, zn; mutant
        1. region a:2-134 [96893] picpiclink
      2. 1l1z picpicxrefxref
        covalent-DNA intermediate
        complexed with ped, zn
        1. region a:2-134 [75912] picpiclink
      3. 1l1t picpicxrefxref
        bound to abasic-site containing DNA
        complexed with hpd, zn
        1. region a:2-134 [75909] picpiclink
      4. 1l2d picpicxrefxref
        DNA estranged guanine mismatch recognition complex
        complexed with hpd, zn
        1. region a:2-134 [75921] picpiclink
      5. 1l2c picpicxrefxref
        DNA estranged thymine mismatch recognition complex
        complexed with hpd, zn
        1. region a:2-134 [75918] picpiclink
      6. 1r2y picpicxrefxref
        bound to 8-Oxoguanine (OxoG) containing DNA
        complexed with 8og, zn; mutant
        1. region a:2-134 [96890] picpiclink
      7. 2f5q picpicxrefxref
        automatically matched to d1r2ya2
        complexed with 8og, zn; mutant
        1. region a:2-134 [133005] picpiclink
      8. 1l2b picpicxrefxref
        DNA end-product structure
        complexed with ad2, zn
        1. region a:2-134 [75915] picpiclink
      9. 2f5s picpicxrefxref
        automatically matched to d1r2ya2
        complexed with 8og, zn; mutant
        1. region a:2-134 [133008] picpiclink
    3. Escherichia coli [TaxId: 562] [81616] (1)
      1. 1k82 picpicxrefxref
        covalently trapped with DNA
        complexed with ped, zn
        1. region a:1-128 [75867] picpiclink
        2. region b:1-128 [75870] picpiclink
        3. region c:1-128 [75873] picpiclink
        4. region d:1-128 [75876] picpiclink
    4. Lactococcus lactis [TaxId: 1358] [81617] (7)
      SQ P42371
      1. 1tdz picpicxrefxref
        complexed with fox, gol, zn
        1. region a:2-131 [106788] picpiclink
      2. 1pjj picpicxrefxref
        complexed with 3dr, gol, zn; mutant
        1. region a:1-131 [104165] picpiclink
      3. 1xc8 picpicxrefxref
        automatically matched to d1kfva2
        complexed with fox, gol, zn
        1. region a:2-131 [121853] picpiclink
      4. 1pji picpicxrefxref
        complexed with cry, pdi, zn
        1. region a:1-131 [104162] picpiclink
      5. 1pm5 picpicxrefxref
        complexed with 3dr, gol, zn
        1. region a:1-131 [104191] picpiclink
      6. 1nnj picpicxrefxref
        complexed with cry, pdi, zn; mutant
        1. region a:1-131 [80670] picpiclink
      7. 1kfv picpicxrefxref
        complexed with cry, mse, pdi, zn; mutant
        1. region a:1-131 [75887] picpiclink
        2. region b:1-131 [75890] picpiclink
  2. Endonuclease VIII [82233]
    1. Escherichia coli [TaxId: 562] [82234] (9)
      SQ P50465
      1. 1k3x picpicxrefxref
        complexed with bro, gol, ped, so4, zn
        1. region a:1-124 [77243] picpiclink
      2. 2ea0 picpicxrefxref
        automatically matched to d1k3wa2
        complexed with gol, ped, so4, zn
        1. region a:1-124 [146755] picpiclink
      3. 1k3w picpicxrefxref
        complexed with ped, so4, zn
        1. region a:1-124 [77240] picpiclink
      4. 2opf picpicxrefxref
        automatically matched to d1k3wa2
        complexed with gol, ped, so4, zn; mutant
        1. region a:1-124 [148964] picpiclink
      5. 1q3b picpicxrefxref
        complexed with gol, mg, zn; mutant
        1. region a:1-124 [104519] picpiclink
      6. 1q3c picpicxrefxref
        complexed with gol, mg, zn; mutant
        1. region a:2-124 [104522] picpiclink
      7. 1q39 picpicxrefxref
        complexed with ca, zn
        1. region a:4-124 [104516] picpiclink
      8. 2oq4 picpicxrefxrefxrefxref
        automatically matched to d1k3wa2
        complexed with na, ped, so4, zn; mutant
        1. region a:1-124 [148979] picpiclink
      9. 2oq4 picpicxrefxrefxrefxref
        automatically matched to d1k3wa2
        complexed with na, ped, so4, zn; mutant
        1. region b:1-124 [148982] picpiclink
  3. Endonuclease VIII-like 1 (NEIL1) [110335]
    1. Human (Homo sapiens) [TaxId: 9606] [110336] (1)
      SQ Q96FI4 1-333
      1. 1tdh picpicxrefxref
        complexed with tmn
        1. region a:2-131 [106773] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk