Structural Classification of Proteins
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Fold: beta-Prism II

consists of 3 4-stranded sheets; strands are perpendicular to the 3-fold axis
duplication: consists of two domains of this fold

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: beta-Prism II [51109]
    consists of 3 4-stranded sheets; strands are perpendicular to the 3-fold axis
    duplication: consists of two domains of this fold

Superfamilies:

  1. alpha-D-mannose-specific plant lectins [51110] (1)
    link to SUPERFAMILY database - Superfamily
    1. alpha-D-mannose-specific plant lectins [51111] (6)
      1. Lectin (agglutinin) [51112]
        1. Snowdrop (Galanthus nivalis) [TaxId: 4670] [51113] (3)
          1. 1jpc picpic
            complexed with man
            1. chain a [27986] picpiclink
          2. 1msa picpic
            complexed with mma
            1. chain a [27987] picpiclink
            2. chain b [27988] picpiclink
            3. chain c [27989] picpiclink
            4. chain d [27990] picpiclink
          3. 1niv picpic
            complexed with mdm
            1. chain a [27991] picpiclink
            2. chain c [27992] picpiclink
        2. Garlic (Allium sativum) [TaxId: 4682] [51114] (2)
          1. 1kj1 picpic
            complexed with man
            1. chain a [68638] picpiclink
            2. chain d [68639] picpiclink
            3. chain p [68640] picpiclink
            4. chain q [68641] picpiclink
          2. 1bwu picpic
            complexed with man
            1. chain a [27993] picpiclink
            2. chain d [27994] picpiclink
            3. chain p [27995] picpiclink
            4. chain q [27996] picpiclink
        3. Daffodil (Narcissus pseudonarcissus) [TaxId: 39639] [51115] (1)
          1. 1npl picpic
            complexed with man, pho
            1. chain a [27997] picpiclink
        4. Bluebell (Scilla campanulata) [TaxId: 81759] [51116] (1)
          1. 1b2p picpic
            1. chain a [27998] picpiclink
            2. chain b [27999] picpiclink
      2. Fetuin-binding protein Scafet precursor [51117]
        duplication: consists of two beta-prism II domains
        1. Bluebell (Scilla campanulata) [TaxId: 81759] [51118] (1)
          1. 1dlp picpic
            low resolution structure
            1. region a:1-115 [28000] picpiclink
            2. region a:116-235 [28001] picpiclink
            3. region b:1-113 [28002] picpiclink
            4. region b:123-235 [28003] picpiclink
            5. region c:1-115 [28004] picpiclink
            6. region c:116-236 [28005] picpiclink
            7. region d:1-114 [28006] picpiclink
            8. region d:123-235 [28007] picpiclink
            9. region e:1-115 [28008] picpiclink
            10. region e:116-235 [28009] picpiclink
            11. region f:1-111 [28010] picpiclink
            12. region f:124-235 [28011] picpiclink
      3. Gastrodianin (antifungal protein) [117304]
        1. Gastrodia elata [TaxId: 91201] [117305] (2)
          SQ Q9AXZ2 29-140 # different isoforms
          1. 1xd5 picpic
            complexed with so4
            1. chain a [115155] picpiclink
            2. chain b [115156] picpiclink
            3. chain c [115157] picpiclink
            4. chain d [115158] picpiclink
          2. 1xd6 picpic
            complexed with so4
            1. chain a [115159] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk