Structural Classification of Proteins
home mail help root up expand collapse

Family: Fatty acid binding protein-like

ten-stranded meander beta-sheet folded upon itself
relates to the common fold by opening the barrel and insertion of beta-hairpin

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Lipocalins [50813]
    barrel, closed or opened; n=8, S=12; meander
  4. Superfamily: Lipocalins [50814]
    bind hydrophobic ligands in their interior
    link to SUPERFAMILY database - Superfamily
  5. Family: Fatty acid binding protein-like [50847]
    ten-stranded meander beta-sheet folded upon itself
    relates to the common fold by opening the barrel and insertion of beta-hairpin

Protein Domains:

  1. Muscle fatty acid binding protein (m-fabp) [50848]
    1. Human (Homo sapiens) [TaxId: 9606] [50849] (5)
      1. 1hms picpic
        complexed with ola
        1. chain a [27168] picpiclink
      2. 1hmt picpic
        complexed with ste
        1. chain a [27169] picpiclink
      3. 1hmr picpic
        complexed with ela
        1. chain a [27170] picpiclink
      4. 2hmb picpic
        complexed with fat
        1. chain a [27171] picpiclink
      5. 1g5w picpic
        heart-type
        1. chain a [60293] picpiclink
    2. Cow (Bos taurus) [TaxId: 9913] [50850] (1)
      1. 1bwy picpic
        1. chain a [27172] picpiclink
  2. Intestinal fatty acid binding protein [50851]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [50852] (11)
      SQ P02693
      1. 1ifc picpic
        1. chain a [27173] picpiclink
      2. 1icm picpic
        complexed with myr
        1. chain a [27174] picpiclink
      3. 1icn picpic
        complexed with ola; mutant
        1. chain a [27175] picpiclink
      4. 1dc9 picpic
        mutant
        1. chain a [27176] picpiclink
      5. 2ifb picpic
        complexed with plm
        1. chain a [27177] picpiclink
      6. 1ifb picpic
        1. chain a [27178] picpiclink
      7. 1sa8 picpic
        stable and compact all-beta-sheet variant
        1. chain a [105406] picpiclink
      8. 1t8v picpic
        mutant
        1. region a:1-131 [119191] picpiclink
      9. 1ure picpic
        complexed with plm
        1. chain a [27179] picpiclink
      10. 1a57 picpic
        helix-less variant
        1. chain a [27181] picpiclink
      11. 1ael picpic
        1. chain a [27180] picpiclink
    2. Human (Homo sapiens) [TaxId: 9606] [50853] (3)
      1. 1kzw picpic
        1. chain a [84478] picpiclink
      2. 1kzx picpic
        mutant
        1. chain a [84479] picpiclink
      3. 3ifb picpic
        1. chain a [27182] picpiclink
  3. Brain fatty acid binding protein [63809]
    1. Human (Homo sapiens) [TaxId: 9606] [63810] (3)
      1. 1fdq picpic
        complexed with hxa
        1. chain a [59776] picpiclink
        2. chain b [59777] picpiclink
      2. 1fe3 picpic
        complexed with oleic acid
        complexed with oli
        1. chain a [59780] picpiclink
      3. 1jjx picpic
        1. chain a [77129] picpiclink
  4. Epidermal fatty acid binding protein [50854]
    1. Human (Homo sapiens) [TaxId: 9606] [50855] (2)
      1. 1b56 picpic
        complexed with plm
        1. chain a [27183] picpiclink
      2. 1jjj picpic
        1. chain a [71697] picpiclink
  5. Adipocyte lipid-binding protein, ALBP [50856]
    1. Mouse (Mus musculus) [TaxId: 10090] [50857] (17)
      1. 1g7n picpic
        complexed with po4; mutant
        1. chain a [83274] picpiclink
      2. 1adl picpic
        complexed with acd, ox, ppi
        1. chain a [27186] picpiclink
      3. 1lic picpic
        complexed with cyo, hds, ppi
        1. chain a [27187] picpiclink
      4. 1lif picpic
        complexed with ste
        1. chain a [27185] picpiclink
      5. 1lid picpic
        complexed with ola
        1. chain a [27184] picpiclink
      6. 1lie picpic
        complexed with cyo, plm, ppi
        1. chain a [27189] picpiclink
      7. 1lib picpic
        1. chain a [27188] picpiclink
      8. 1g74 picpic
        complexed with ola, po4; mutant
        1. chain a [83273] picpiclink
      9. 1ab0 picpic
        mutant
        1. chain a [27190] picpiclink
      10. 1a18 picpic
        complexed with nph
        1. chain a [27192] picpiclink
      11. 2ans picpic
        complexed with 2an, cl
        1. chain a [27195] picpiclink
        2. chain b [27196] picpiclink
      12. 1alb picpic
        1. chain a [27191] picpiclink
      13. 2q9s picpic
        automatically matched to d1a18a_
        complexed with eic, so4
        1. region a:1-131 [150168] picpiclink
      14. 2qm9 picpic
        automatically matched to d1a18a_
        complexed with so4, tdz
        1. region a:1-131 [150876] picpiclink
      15. 2qm9 picpic
        automatically matched to d1a18a_
        complexed with so4, tdz
        1. region b:1-131 [150877] picpiclink
      16. 1a2d picpic
        complexed with cl, pyx
        1. chain a [27193] picpiclink
        2. chain b [27194] picpiclink
      17. 1acd picpic
        mutant
        1. chain a [27197] picpiclink
    2. Human (Homo sapiens) [TaxId: 9606] [110275] (4)
      SQ P15090
      1. 2hnx picpic
        automatically matched to d1toua_
        complexed with acy, plm, po4
        1. region a:1-131 [136633] picpiclink
      2. 2nnq picpic
        automatically matched to d1toua_
        complexed with so4, t4b
        1. region a:1-131 [138399] picpiclink
      3. 1tow picpic
        complexed with crz
        1. chain a [107180] picpiclink
      4. 1tou picpic
        complexed with b1v
        1. chain a [107178] picpiclink
  6. Fatty acid-binding protein homolog 1 [89366]
    1. Flat worm (Echinococcus granulosus) [TaxId: 6210] [89367] (1)
      1. 1o8v picpic
        complexed with ace, cso, plm
        1. chain a [86680] picpiclink
  7. Fatty acid-binding protein [50858]
    1. Tobacco hornworm (Manduca sexta) [TaxId: 7130] [50859] (1)
      1. 1mdc picpic
        complexed with plm, so4
        1. chain a [27198] picpiclink
    2. Desert locust (Schistocerca gregaria) [TaxId: 7010] [50860] (1)
      1. 1ftp picpic
        1. chain a [27199] picpiclink
        2. chain b [27200] picpiclink
  8. Cellular retinoic-acid-binding protein (CRABP) [50861]
    1. Human (Homo sapiens), CRABP-II [TaxId: 9606] [50862] (12)
      1. 2fs6 picpic
        automatically matched to d1blr__
        complexed with act, cl, na
        1. region a:2-137 [134005] picpiclink
      2. 2fs6 picpic
        automatically matched to d1blr__
        complexed with act, cl, na
        1. region b:1-137 [134006] picpiclink
      3. 2fr3 picpic
        automatically matched to d1blr__
        complexed with act, rea
        1. region a:1-137 [133964] picpiclink
      4. 2fs7 picpic
        automatically matched to d1blr__
        complexed with act, cl
        1. region a:2-137 [134007] picpiclink
      5. 2fs7 picpic
        automatically matched to d1blr__
        complexed with act, cl
        1. region b:1-137 [134008] picpiclink
      6. 1cbs picpic
        complexed with rea
        1. chain a [27201] picpiclink
      7. 3cbs picpic
        1. chain a [27202] picpiclink
      8. 2cbs picpic
        1. chain a [27203] picpiclink
      9. 1cbq picpic
        complexed with po4, re9
        1. chain a [27204] picpiclink
      10. 1xca picpic
        mutant
        1. chain a [27205] picpiclink
        2. chain b [27206] picpiclink
      11. 1bm5 picpic
        mutant
        1. chain a [27207] picpiclink
      12. 1blr picpic
        1. chain a [27208] picpiclink
    2. Cow and mouse (Bos taurus) and (Mus musculus), CRABP-I, identical sequences [TaxId: 9913] [50863] (3)
      1. 2cbr picpic
        1. chain a [27211] picpiclink
      2. 1cbi picpic
        1. chain a [27209] picpiclink
        2. chain b [27210] picpiclink
      3. 1cbr picpic
        CASP1
        complexed with rea
        1. chain a [27212] picpiclink
        2. chain b [27213] picpiclink
  9. Cellular retinol-binding protein II (CRBP) [50864]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [50865] (9)
      1. 1opb picpic
        complexed with ret
        1. chain a [27216] picpiclink
        2. chain b [27217] picpiclink
        3. chain c [27218] picpiclink
        4. chain d [27219] picpiclink
      2. 1opa picpic
        1. chain a [27214] picpiclink
        2. chain b [27215] picpiclink
      3. 1crb picpic
        complexed with cd, rtl
        1. chain a [27220] picpiclink
      4. 1kgl picpic
        complexed with rtl
        1. chain a [72446] picpiclink
      5. 1jbh picpic
        1. chain a [71630] picpiclink
      6. 1mx8 picpic
        complexed with rtl
        1. chain a [85178] picpiclink
      7. 1mx7 picpic
        1. chain a [85177] picpiclink
      8. 1eii picpic
        complexed with rtl
        1. chain a [27221] picpiclink
      9. 1b4m picpic
        1. chain a [27222] picpiclink
    2. Zebrafish (Danio rerio) [TaxId: 7955] [75000] (2)
      1. 1kqw picpic
        complexed with rtl
        1. chain a [72887] picpiclink
      2. 1kqx picpic
        1. chain a [72888] picpiclink
  10. Cellular retinol-binding protein III [63811]
    1. Human (Homo sapiens) [TaxId: 9606] [63812] (1)
      1. 1ggl picpic
        1. chain a [60484] picpiclink
        2. chain b [60485] picpiclink
  11. Liver fatty acid binding protein [50866]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [50867] (4)
      1. 1lfo picpic
        complexed with ace, beo, ola, unx
        1. chain a [27223] picpiclink
      2. 2ju8 picpic
        automatically matched to d1lfoa_
        complexed with ola
        1. region a:1-127 [148211] picpiclink
      3. 2ju3 picpic
        automatically matched to d1lfoa_
        1. region a:1-127 [148209] picpiclink
      4. 2ju7 picpic
        automatically matched to d1lfoa_
        1. region a:1-127 [148210] picpiclink
    2. Human (Homo sapiens) [TaxId: 9606] [141464] (8)
      SQ P07148 1-127
      1. 2f73 picpic
        1. region a:1-127 [133071] picpiclink
      2. 2f73 picpic
        automatically matched to 2F73 A:1-127
        1. region b:1-127 [133072] picpiclink
      3. 2f73 picpic
        automatically matched to 2F73 A:1-127
        1. region c:1-127 [133073] picpiclink
      4. 2f73 picpic
        automatically matched to 2F73 A:1-127
        1. region d:1-127 [133074] picpiclink
      5. 2f73 picpic
        automatically matched to 2F73 A:1-127
        1. region e:1-127 [133075] picpiclink
      6. 2f73 picpic
        automatically matched to 2F73 A:1-127
        1. region f:1-127 [133076] picpiclink
      7. 2f73 picpic
        automatically matched to 2F73 A:1-127
        1. region g:1-127 [133077] picpiclink
      8. 2f73 picpic
        automatically matched to 2F73 A:1-127
        1. region h:1-127 [133078] picpiclink
  12. Liver basic fatty acid binding protein, LB_FABP [89368]
    1. Chicken (Gallus gallus) [TaxId: 9031] [89369] (5)
      SQ P80226
      1. 1tw4 picpic
        complexed with chd
        1. chain a [112690] picpiclink
        2. chain b [112691] picpiclink
      2. 1tvq picpic
        1. chain a [112685] picpiclink
      3. 2jn3 picpic
        automatically matched to d1mvga_
        complexed with jn3
        1. region a:1-125 [148142] picpiclink
      4. 1mvg picpic
        1. chain a [85145] picpiclink
      5. 1zry picpic
        automatically matched to d1mvga_
        1. region a:1-125 [125569] picpiclink
    2. Argentine common toad (Bufo arenarum) [TaxId: 38577] [89370] (1)
      1. 1p6p picpic
        1. chain a [87839] picpiclink
    3. Axolotl (Ambystoma mexicanum) [TaxId: 8296] [141465] (2)
      SQ P81400 1-125
      1. 2ftb picpic
        automatically matched to 2FT9 A:1-125
        complexed with ola
        1. region a:1-125 [134057] picpiclink
      2. 2ft9 picpic
        complexed with chd
        1. region a:1-125 [134056] picpiclink
  13. Cellular retinol-binding protein IV [82157]
    1. Human (Homo sapiens) [TaxId: 9606] [82158] (1)
      1. 1lpj picpic
        1. chain a [78123] picpiclink
  14. P2 myelin protein [50868]
    1. Cow (Bos taurus), caudal spinal root myelin [TaxId: 9913] [50869] (1)
      1. 1pmp picpic
        complexed with oli
        1. chain a [27224] picpiclink
        2. chain b [27225] picpiclink
        3. chain c [27226] picpiclink
    2. Horse (Equus caballus) [TaxId: 9796] [141466] (1)
      SQ P02690 1-131
      1. 1yiv picpic
        complexed with epe, lda
        1. region a:1-131 [123367] picpiclink
  15. Ileal lipid-binding protein [50870]
    1. Human (Homo sapiens) [TaxId: 9606] [82159] (2)
      1. 1o1v picpic
        complexed with tch
        1. chain a [81077] picpiclink
      2. 1o1u picpic
        1. chain a [81076] picpiclink
    2. Pig (Sus scrofa) [TaxId: 9823] [50871] (2)
      1. 1eal picpic
        1. chain a [27227] picpiclink
      2. 1eio picpic
        complexed with gch
        1. chain a [27228] picpiclink
  16. Fatty acid-binding protein Sm14 [110276]
    1. Blood fluke (Schistosoma mansoni) [TaxId: 6183] [110277] (2)
      SQ P29498
      1. 1vyf picpic
        complexed with ola
        1. chain a [108902] picpiclink
      2. 1vyg picpic
        complexed with acd
        1. chain a [108903] picpiclink
  17. Der f 13 allergen [141467]
    1. House dust mite (Dermatophagoides farinae) [TaxId: 6954] [141468] (1)
      SQ Q1M2P5 1-131
      1. 2a0a picpic
        1. region a:1-131 [125944] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk